PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG071360.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 744aa    MW: 83373 Da    PI: 6.4776
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG071360.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.2e-2352153199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++ +++a+e+       +++++  ++l+ +d++g +W++++i+r++++r++l++GW+ Fv++++L +gD ++F   +
  TRIDC3BG071360.6  52 FCKTLTASDTSTHGGFSVLRRHADEClppldmtQSPPT--QELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--R 140
                       99*****************************7555544..58************************************************..4 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                        +++el+v+v+r+
  TRIDC3BG071360.6 141 GESGELRVGVRRA 153
                       49999*****996 PP
2Auxin_resp106.53e-35178259183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       a+ha++tk++F+v+Y+Pr+s+seF+++++k+++++k+ +s+G+Rfkm+fe+e+++e+r++Gt+vg  +ld+  Wp+S WrsLk
  TRIDC3BG071360.6 178 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFTGTIVGSDNLDQ-LWPESSWRSLK 259
                       89******************************************************************999.9********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    
QRRAQEAEAD TDEVYAQVML MPEPEQSDAT TTEKSSPATG GTTPARLAVR SFCKTLTASD  60
TSTHGGFSVL RRHADECLPP LDMTQSPPTQ ELVAKDLHGM EWRFRHIFRG QPRRHLLQSG  120
WSVFVSSKRL VAGDAFIFLR GESGELRVGV RRAMRQLSNI ASSVISSHSM HLGVLATAWH  180
AINTKTMFTV YYKPRTSRSE FIIPYDKYMD SVKNIYSIGT RFKMRFEGEE APEQRFTGTI  240
VGSDNLDQLW PESSWRSLKV RWDESSTIPR PDRVSPWEIE PASSPPVNPL PLSRAKRSRP  300
NVPPASPESS LRTKEGATKA DMDCAQAQRN QNNTVLPGQE QRSNKLTDIN DFDATVQKPM  360
MWSPPPPNIG KTNPLTFQQR PSVHNSIQLG RRETDFKDAS SGAQPFGDSL GFFMQTTFDE  420
APNRLGSFKN QFQDHSYARQ FADPYLFMHQ QPSLTVESSR KMHTENNDLH FWNGPSTVYG  480
NSIDQAQDFR FKEHPSNWLS PQFSRAEQPR VIRPHASIAP IELEKTTEGS DFKIFGFKVD  540
TASAGFNHLN SPMAGTHEPV LQTQPSVSLD HLQTDCSPEV SLSIAGTTEN EKNMQQCPQS  600
SKDVQSKSHG ASTRSCTKVH KQGVALGRSV DLSKFVDYDE LTAELDKMFE FDGELMSSNK  660
NWQIVYTDNE GDMMLVGDDP WEEFCSIVRK ICIYTKEEVQ KMNSKPSGPR KEEGSVDGDG  720
ATEKAHLPES SDLNSSQLGC VKAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein