PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG071600.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 239aa MW: 26902.2 Da PI: 4.7398

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG071600.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	63.5	4.6e-20	14	86	13	85
NF-YB 13 vsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85 +++i+k++lP + ++++d+++++ ec +efi +++se++d c r+++kti+++ ++ al +lGf++yve++ + TRIDC3BG071600.3 14 MTKIIKEMLPPDVRVARDTQDLLVECCVEFINLLSSESNDVCSRDDKKTIAPEHVIRALQDLGFKEYVEEVYA 86 789******************************************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
AGKMSDMYGE ETTMTKIIKE MLPPDVRVAR DTQDLLVECC VEFINLLSSE SNDVCSRDDK 60 KTIAPEHVIR ALQDLGFKEY VEEVYAAYEQ HKLETLDSPK ATKFTGIEMT EEEAVAEQQR 120 MFAEARARMN NGAAKPKEPA LEPQNQPQQP PQPQLQLHPQ AQQPPQPQSQ LHHPQSQQPL 180 HPQLQPYTQA PPQQPLHPQL QPYTQAPPQQ PLQPPLQLYP QAQPEQPLQP QSSGSTTGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23090.4	1e-59	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG071600.3