PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG072450.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 795aa MW: 87109.9 Da PI: 7.5023

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.5e-08	29	85	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.4 29 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 85 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 795 aa Download sequence
LVVAQCRLTG VNPLAQEMAA GALSIKIGKK PRDLLNPKAV NSMQSLFAVK DTLGKRETRE 60 ISALCGLTVT QVREFFASRR TRVRKAVRLS REKALKLEAS KTALKLEASK TALKLEASKT 120 ATNICSLNTE QTPLDIETHA QVVEPLSTLE PLEMFQSSSQ LAEAPQSSLQ QPEVQQCTAT 180 PIPVTPTGMI QPTDAKINPD SVQKETKQEE VAPGVESEDK KFLDSIFALM RKEETFSGQV 240 KLMEWILQIN NATILSWFLT MGGLTIVSTW LSQAATEEQT TVILIIFKVL LHLPLHKALP 300 AHMSVVLQTI NRLRFYRTQD ISGRARNLLS RLSKVLVRSQ ASKKPQKDLI CKQRISEILH 360 DESWRSEVDI TEEILALTEG ASESRKPEPK KTPLLLTASA DESYKKSPVQ TKSKERRKVQ 420 LVEHPNRKAA GKNAHSARST CTNNSRPLSA DDIQKAKMRA MFMQEKYGKV DTSKVSDKPE 480 TTENKKPSGL VNSNEPRMPR SPLTSTAKQP VDPSPSTSIQ NAVPLSDNPE ILATPKLNIA 540 PRETPIEKLD SKRVHWQIPP EVWIDPSWSV SAGENSKELD VQAQRNRREK ETFYASPKDI 600 PSNPKDPWDL EMDFDDSLTP EIPIEQPPDA DTMEVDGVGA APPNMVVPGE IQQVGSTSSS 660 SLTVASGANG AASEPDLELL AVLLKNPQLV FALSSNEVGN LPTEQTVALL DMLKQTGLGL 720 SELVNSLPNG AGVPNKPEPV PETIPTSLPS PTPPKDLPAS VSPLALFFFS FSSVKAVTIL 780 FMYICMLSLA GGLEI

Sequence ? help Back to Top

Protein Sequence Length: 795 aa Download sequence

LVVAQCRLTG VNPLAQEMAA GALSIKIGKK PRDLLNPKAV NSMQSLFAVK DTLGKRETRE  60
ISALCGLTVT QVREFFASRR TRVRKAVRLS REKALKLEAS KTALKLEASK TALKLEASKT  120
ATNICSLNTE QTPLDIETHA QVVEPLSTLE PLEMFQSSSQ LAEAPQSSLQ QPEVQQCTAT  180
PIPVTPTGMI QPTDAKINPD SVQKETKQEE VAPGVESEDK KFLDSIFALM RKEETFSGQV  240
KLMEWILQIN NATILSWFLT MGGLTIVSTW LSQAATEEQT TVILIIFKVL LHLPLHKALP  300
AHMSVVLQTI NRLRFYRTQD ISGRARNLLS RLSKVLVRSQ ASKKPQKDLI CKQRISEILH  360
DESWRSEVDI TEEILALTEG ASESRKPEPK KTPLLLTASA DESYKKSPVQ TKSKERRKVQ  420
LVEHPNRKAA GKNAHSARST CTNNSRPLSA DDIQKAKMRA MFMQEKYGKV DTSKVSDKPE  480
TTENKKPSGL VNSNEPRMPR SPLTSTAKQP VDPSPSTSIQ NAVPLSDNPE ILATPKLNIA  540
PRETPIEKLD SKRVHWQIPP EVWIDPSWSV SAGENSKELD VQAQRNRREK ETFYASPKDI  600
PSNPKDPWDL EMDFDDSLTP EIPIEQPPDA DTMEVDGVGA APPNMVVPGE IQQVGSTSSS  660
SLTVASGANG AASEPDLELL AVLLKNPQLV FALSSNEVGN LPTEQTVALL DMLKQTGLGL  720
SELVNSLPNG AGVPNKPEPV PETIPTSLPS PTPPKDLPAS VSPLALFFFS FSSVKAVTIL  780
FMYICMLSLA GGLEI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	85	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-153	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.4