PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG072450.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 1222aa MW: 133592 Da PI: 8.1259

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.4	2.4e-08	29	85	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.5 29 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 85 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1222 aa Download sequence
LVVAQCRLTG VNPLAQEMAA GALSIKIGKK PRDLLNPKAV NSMQSLFAVK DTLGKRETRE 60 ISALCGLTVT QVREFFASRR TRVRKAVRLS REKALKLEAS KTALKLEASK TALKLEASKT 120 ATNICSLNTE QTPLDIETHA QVVEPLSTLE PLEMFQSSSQ LAEAPQSSLQ QPEVQQCTAT 180 PIPVTPTGMI QPTDAKINPD SVQKETKQEE VAPGVESEDK KFLDSIFALM RKEETFSGQV 240 KLMEWILQIN NATILSWFLT MGGLTIVSTW LSQAATEEQT TVILIIFKVL LHLPLHKALP 300 AHMSVVLQTI NRLRFYRTQD ISGRARNLLS RLSKVLVRSQ ASKKPQKDLI CKQRISEILH 360 DESWRSEVDI TEEILALTEG ASESRKPEPK KTPLLLTASA DESYKKSPVQ TKSKERRKVQ 420 LVEHPNRKAA GKNAHSARST CTNNSRPLSA DDIQKAKMRA MFMQEKYGKV DTSKVSDKPE 480 TTENKKPSGL VNSNEPRMPR SPLTSTAKQP VDPSPSTSIQ NAVPLSDNPE ILATPKLNIA 540 PRETPIEKLD SKRVHWQIPP EVWIDPSWSV SAGENSKELD VQAQRNRREK ETFYASPKDI 600 PSNPKDPWDL EMDFDDSLTP EIPIEQPPDA DTMEVDGVGA APPNMVVPGE IQQVGSTSSS 660 SLTVASGANG AASEPDLELL AVLLKNPQLV FALSSNEVGN LPTEQTVALL DMLKQTGLGL 720 SELVNSLPNG AGVPNKPEPV PETIPTSLPS PTPPKDLPAS VGWRSDFPTH ARPSNSQQAH 780 LPNNGNTPFA SEVHKSFSNV VSPLPSQPYT SVSALPAHIQ SNAPSLPPQS AVSVNSLTQY 840 AAPMNNMFDR TSVHQHTQPY GLASDPTAVA IHQQPAVNKP AHEFQNMSNS GLARSLTPEP 900 NAAAYATFPW QSGAANVAST GRSTTPDQWA DRVTNSFNDA SAPHLNQSAY SNQSLQSTYD 960 AYGSSTSASS QGLNRNGYIQ TSEYQMSGRN VRQRHSLSPE PGSARVYGGT QGYIPEVSKL 1020 VNYGQQSYNP PVASTDWSSG QQSYTPAEPS RDWSSLQQRY TSAESSRDRS SGQQGYTPAE 1080 PSRQWSSGQQ SYTPAEPSRQ WSSGQQGYTP AESSNHQWSS GQQGYTPAGP SNHRSSGQQG 1140 YTPAEPSRQW SSAQQGYTPS EPSGQQGYTP AEPSRPWSTA SQGAQNPDTS RQWSGAGKQQ 1200 DYYNTPSDGR SPYDQRRRRR WE

Sequence ? help Back to Top

Protein Sequence Length: 1222 aa Download sequence

LVVAQCRLTG VNPLAQEMAA GALSIKIGKK PRDLLNPKAV NSMQSLFAVK DTLGKRETRE  60
ISALCGLTVT QVREFFASRR TRVRKAVRLS REKALKLEAS KTALKLEASK TALKLEASKT  120
ATNICSLNTE QTPLDIETHA QVVEPLSTLE PLEMFQSSSQ LAEAPQSSLQ QPEVQQCTAT  180
PIPVTPTGMI QPTDAKINPD SVQKETKQEE VAPGVESEDK KFLDSIFALM RKEETFSGQV  240
KLMEWILQIN NATILSWFLT MGGLTIVSTW LSQAATEEQT TVILIIFKVL LHLPLHKALP  300
AHMSVVLQTI NRLRFYRTQD ISGRARNLLS RLSKVLVRSQ ASKKPQKDLI CKQRISEILH  360
DESWRSEVDI TEEILALTEG ASESRKPEPK KTPLLLTASA DESYKKSPVQ TKSKERRKVQ  420
LVEHPNRKAA GKNAHSARST CTNNSRPLSA DDIQKAKMRA MFMQEKYGKV DTSKVSDKPE  480
TTENKKPSGL VNSNEPRMPR SPLTSTAKQP VDPSPSTSIQ NAVPLSDNPE ILATPKLNIA  540
PRETPIEKLD SKRVHWQIPP EVWIDPSWSV SAGENSKELD VQAQRNRREK ETFYASPKDI  600
PSNPKDPWDL EMDFDDSLTP EIPIEQPPDA DTMEVDGVGA APPNMVVPGE IQQVGSTSSS  660
SLTVASGANG AASEPDLELL AVLLKNPQLV FALSSNEVGN LPTEQTVALL DMLKQTGLGL  720
SELVNSLPNG AGVPNKPEPV PETIPTSLPS PTPPKDLPAS VGWRSDFPTH ARPSNSQQAH  780
LPNNGNTPFA SEVHKSFSNV VSPLPSQPYT SVSALPAHIQ SNAPSLPPQS AVSVNSLTQY  840
AAPMNNMFDR TSVHQHTQPY GLASDPTAVA IHQQPAVNKP AHEFQNMSNS GLARSLTPEP  900
NAAAYATFPW QSGAANVAST GRSTTPDQWA DRVTNSFNDA SAPHLNQSAY SNQSLQSTYD  960
AYGSSTSASS QGLNRNGYIQ TSEYQMSGRN VRQRHSLSPE PGSARVYGGT QGYIPEVSKL  1020
VNYGQQSYNP PVASTDWSSG QQSYTPAEPS RDWSSLQQRY TSAESSRDRS SGQQGYTPAE  1080
PSRQWSSGQQ SYTPAEPSRQ WSSGQQGYTP AESSNHQWSS GQQGYTPAGP SNHRSSGQQG  1140
YTPAEPSRQW SSAQQGYTPS EPSGQQGYTP AEPSRPWSTA SQGAQNPDTS RQWSGAGKQQ  1200
DYYNTPSDGR SPYDQRRRRR WE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	79	85	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-149	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.5