PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG072450.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 350aa MW: 38925.3 Da PI: 10.348

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG072450.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.7e-09	25	81	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +++R ++++ ++ +++lF+ + ++ ++e +e+++ +gLt +qV+ +F rR++ +k TRIDC3BG072450.7 25 KKPRDLLNPKAVNSMQSLFAVKDTLGKRETREISALCGLTVTQVREFFASRRTRVRK 81 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
QCRLTGVNPL AQEMAAGALS IKIGKKPRDL LNPKAVNSMQ SLFAVKDTLG KRETREISAL 60 CGLTVTQVRE FFASRRTRVR KAVRLSREKA LKLEASKTAL KLEASKTALK LEASKTATNI 120 CSLNTEQTPL DIETHAQVVE PLSTLEPLEM FQSSSQLAEA PQSSLQQPEV QQCTATPIPV 180 TPTGMIQPTD AKINPDSVQK ETKQEEVAPG VESEDKKFLD SIFALMRKEE TFSGQVKLME 240 WILQINNATI LSWFLTMGGL TIVSTWLSQA ATEEQTTVIL IIFKVLLHLP LHKALPAHMS 300 VVLQTINRLR FYRTQDISGR ARNLLSRLSK VLVRSQASKK PQKDLICKQR

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

QCRLTGVNPL AQEMAAGALS IKIGKKPRDL LNPKAVNSMQ SLFAVKDTLG KRETREISAL  60
CGLTVTQVRE FFASRRTRVR KAVRLSREKA LKLEASKTAL KLEASKTALK LEASKTATNI  120
CSLNTEQTPL DIETHAQVVE PLSTLEPLEM FQSSSQLAEA PQSSLQQPEV QQCTATPIPV  180
TPTGMIQPTD AKINPDSVQK ETKQEEVAPG VESEDKKFLD SIFALMRKEE TFSGQVKLME  240
WILQINNATI LSWFLTMGGL TIVSTWLSQA ATEEQTTVIL IIFKVLLHLP LHKALPAHMS  300
VVLQTINRLR FYRTQDISGR ARNLLSRLSK VLVRSQASKK PQKDLICKQR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	75	81	RRTRVRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	2e-84	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG072450.7