PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG073140.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 706aa MW: 82459.4 Da PI: 8.8622

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG073140.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.2	7.8e-25	25	119	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 +fYn+YA e GFsvrks+ + n+ i+ r+ vCs++g+re+++ k ++++rr+r+ tr+gC+akl++++++ +g+w v+++ eH+H+l TRIDC3BG073140.1 25 EFYNKYALEKGFSVRKSYVEWDGSNRYIILRKIVCSRQGFREDKRMKrkmEDRKRRPRSLTRVGCNAKLVITRKEeTGRWFVKDFIDEHSHPL 117 6***************************************9998888889999*************9999**************9 PP FAR1 90 ap 91 ap TRIDC3BG073140.1 118 AP 119 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 706 aa Download sequence
ASDESMFEYV NIVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNR YIILRKIVCS 60 RQGFREDKRM KRKMEDRKRR PRSLTRVGCN AKLVITRKEE TGRWFVKDFI DEHSHPLAPR 120 DLSCLLRSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGFDKVGCI KRDIYNFYHA 180 NKQETISAGD AKTVIMHMMA RRERDVDFFF KYLVDEHVHL KGLFWADSQS RLDYEAFGDV 240 IVFDSTYRTN KYNLPFVPFV GLNHHCSTVI FGCGIISHET SQAYEWMLQT FSDCMAQKHP 300 ISVITDGDLA MQRAIRVVWP DSNHRLCIWH IQQNIVRHLH DDDVKEEFRS FIYDTSSIEE 360 HEIKWIQFLQ RNKVTSEESW LHQMYQMRKL WCAPYLEGRC FLGLSSNQRS ESLNSVLHTH 420 LKGKMSLFEM LEHYERCLAS RRINEALHDV EALQSVPFTE ENASPLEKHA ATVFTPRVFK 480 MVLRSIDAVS KCQIREILDG SEDSTYVVSK QERMDKKFGV RIEEQGGLLH RVSCSCRKLE 540 CAGTPCSHIF YILGILKQTI LPGCCVPTMW TINAKCAYAP TRKNQMYDYS LSLQRYRELR 600 NCSHAASFQA CHSDEHYHRL KMLLQAQHHG KQSSFELVDS KESTNAQHNS IRFGPLMPHS 660 QKVDKVLDPV HVPGRGAPKK RLQAKTKKSR SQNICGYCKK SGHNRR

Sequence ? help Back to Top

Protein Sequence Length: 706 aa Download sequence

ASDESMFEYV NIVSKMFDSE AEGYEFYNKY ALEKGFSVRK SYVEWDGSNR YIILRKIVCS  60
RQGFREDKRM KRKMEDRKRR PRSLTRVGCN AKLVITRKEE TGRWFVKDFI DEHSHPLAPR  120
DLSCLLRSHR RISDEQKADI ADMEKCGIRK YRIMDILCFQ YGGFDKVGCI KRDIYNFYHA  180
NKQETISAGD AKTVIMHMMA RRERDVDFFF KYLVDEHVHL KGLFWADSQS RLDYEAFGDV  240
IVFDSTYRTN KYNLPFVPFV GLNHHCSTVI FGCGIISHET SQAYEWMLQT FSDCMAQKHP  300
ISVITDGDLA MQRAIRVVWP DSNHRLCIWH IQQNIVRHLH DDDVKEEFRS FIYDTSSIEE  360
HEIKWIQFLQ RNKVTSEESW LHQMYQMRKL WCAPYLEGRC FLGLSSNQRS ESLNSVLHTH  420
LKGKMSLFEM LEHYERCLAS RRINEALHDV EALQSVPFTE ENASPLEKHA ATVFTPRVFK  480
MVLRSIDAVS KCQIREILDG SEDSTYVVSK QERMDKKFGV RIEEQGGLLH RVSCSCRKLE  540
CAGTPCSHIF YILGILKQTI LPGCCVPTMW TINAKCAYAP TRKNQMYDYS LSLQRYRELR  600
NCSHAASFQA CHSDEHYHRL KMLLQAQHHG KQSSFELVDS KESTNAQHNS IRFGPLMPHS  660
QKVDKVLDPV HVPGRGAPKK RLQAKTKKSR SQNICGYCKK SGHNRR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	81	KRMKRKMEDRKRRP
2	76	81	DRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-96	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG073140.1