PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG075060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 153aa    MW: 17168.7 Da    PI: 9.5779
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG075060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.71e-0998140145
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeek 45 
                       +fY++YA++vGF vr  +++    ++   +++f C keg+r e+ 
  TRIDC3BG075060.1  98 EFYRTYAHNVGFGVRLGQQRVV--DNVLQWKRFLCAKEGFRPEKG 140
                       6*****************9988..8889************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MQASSATSPL GQPTVPIITN CVPTLSRVES VRSVQNQDFS DATSFAEINS PMLLINDSST  60
PKKKQSFSQE GSLYRPQCDE ELKPKVGMIF DDIGSVLEFY RTYAHNVGFG VRLGQQRVVD  120
NVLQWKRFLC AKEGFRPEKG MVVVDPLKKR RKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1148152KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-08FAR1 family protein