PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC3BG075410.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 215aa MW: 23574.6 Da PI: 7.1385

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC3BG075410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.7	2.4e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ede+lv +++ +G g W + +++ g++R++k+c++rw++yl TRIDC3BG075410.1 14 RGAWTAMEDEILVSYINDHGEGKWGSLPKRAGLNRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.5	1.1e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++++lG++ W++Ia +++ gRt++++k++w++ TRIDC3BG075410.1 67 RGNISDDEEELIVRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111 7899****************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MGRKPCCAKE GLNRGAWTAM EDEILVSYIN DHGEGKWGSL PKRAGLNRCG KSCRLRWLNY 60 LRPGIKRGNI SDDEEELIVR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNT TLSKRNLQSH 120 GAGCSNHPQA KPPPQAGGEA HALPEGTSSS PIRTKALRCT TTVLAAAEGV HEQGRAAPEH 180 VEEEDQLGDC LSIGSIDLDL EGIELGFMMS PWSGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	6e-67	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC3BG075410.1