PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG077630.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 179aa    MW: 20328.2 Da    PI: 7.2965
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG077630.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS182.52.9e-5629174229374
              GRAS 229 klvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerlee 321
                       + +++lsPkv+vv+eqea+hn++ + erf+eal+yy+alfd+le++++r s er+ vEr llg+ei+n+vac gaerrerhe+l +W +r+e 
  TRIDC3BG077630.2  29 ESLRGLSPKVMVVAEQEASHNTPGLTERFVEALNYYAALFDCLEVGAARGSVERARVERWLLGEEIKNIVACDGAERRERHERLDRWAARMEG 121
                       5789***************************************************************************************** PP

              GRAS 322 aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                       aGF+ vpls++a  qa++  +  + dg++v ee+g+++l+W++r+L+svSaWr
  TRIDC3BG077630.2 122 AGFGRVPLSYYALLQARRAAQGLGCDGFKVREEKGTFFLCWQERALFSVSAWR 174
                       ****************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MALTKEAERL DVPFQFNPVV SRLDALDVES LRGLSPKVMV VAEQEASHNT PGLTERFVEA  60
LNYYAALFDC LEVGAARGSV ERARVERWLL GEEIKNIVAC DGAERRERHE RLDRWAARME  120
GAGFGRVPLS YYALLQARRA AQGLGCDGFK VREEKGTFFL CWQERALFSV SAWRGRRFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.13e-51GRAS family protein