PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG079320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 245aa    MW: 27311.1 Da    PI: 7.344
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG079320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-1370122155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                       r+ +hn+ Er RR+++N+ ++ Lr+llP+ +   + kKls   ++ ++ +YI +Lq
  TRIDC3BG079320.1  70 RKISHNAYERDRRKELNELYSDLRSLLPEdD---RTKKLSIPITVSRVLKYIPELQ 122
                       6889*************************55...8888***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGHHYQLFED PFASSMSLLE PDIFSGTGVH HHLAPSMQWL GLGNHGIPVA PTVNNGTSSG  60
GDGDGSGSHR KISHNAYERD RRKELNELYS DLRSLLPEDD RTKKLSIPIT VSRVLKYIPE  120
LQKQVEGLEK KKEELTRASC KPGVLTMREN TAPIVSATCI DDRDIMVQVS LVSTMAGDLP  180
LSKCINVLEN EGLRLISSST SAFQNRTFYS LHLQRTQRTM SKECPAFCEE LENVMKQKAG  240
VRLHH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-32bHLH family protein