PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG079340.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 179aa    MW: 20373.5 Da    PI: 9.5212
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG079340.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.2e-13254155
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                      r+ +hn+ Er RR+++N+ ++ Lr+llP  +   + kKls   ++ ++ +YI +Lq
  TRIDC3BG079340.3  2 RKISHNAYERDRRKQLNELYSDLRSLLPDtD---HTKKLSIPITVSRVLKYIPELQ 54
                      6889*************************55...7777***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
HRKISHNAYE RDRRKQLNEL YSDLRSLLPD TDHTKKLSIP ITVSRVLKYI PELQKQVDGL  60
EKKKEELTRA SCKPGVLTMK GNTAPIVSAT CLDDREIMVQ VSLVSTMAGV LPMSKCIKVL  120
ENEGLRLISS STSAFQNRTF YSLHLQRTQR TMSKECPAFC EELENALTQN AGLRLHHHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-33bHLH family protein