PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG079920.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family SRS
Protein Properties Length: 180aa    MW: 17879.1 Da    PI: 6.6754
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG079920.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702103.92.7e-32510563154
            DUF702  63 aaasaaeaaskrkrelkskkqsalsstklssaeskkeletss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkG 145
                       + a+a++a sk++r l s++q ++s+t++s+a+++++ +t+s          lP++v+++avfrcvrv+svddge+e+aYq++v+i+GhvfkG
  TRIDC3BG079920.2   5 SPANATAAGSKKPRLL-SSQQPTTSHTSTSNATTPRSYDTTSshqdasfrgnLPRQVRAPAVFRCVRVTSVDDGEDEYAYQATVTINGHVFKG 96 
                       4566788899999986.788889999999********9999999************************************************* PP

            DUF702 146 iLydqGlee 154
                       +LydqG+++
  TRIDC3BG079920.2  97 FLYDQGVDD 105
                       ******986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
GSSSSPANAT AAGSKKPRLL SSQQPTTSHT STSNATTPRS YDTTSSHQDA SFRGNLPRQV  60
RAPAVFRCVR VTSVDDGEDE YAYQATVTIN GHVFKGFLYD QGVDDGRASN DIDSSTGGAV  120
PNMSELHLGG GGNAARGGGG GSSSMAPSDM YGGAGAGGAG GGGGGQHILG GGSSYGNTMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12330.17e-27SRS family protein