PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG082130.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 248aa    MW: 27423.9 Da    PI: 5.4012
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG082130.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind101.86.1e-32181092102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y ++++++++ ++ w + +nsfvv d+  f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+h  F +g+++ll
  TRIDC3BG082130.1  18 FVAKTYAMVDNPATNAVVAWGAASNSFVVADPFAFSEILLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHACFLRGQTHLL 101
                       9****************************************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                        +i r++s
  TRIDC3BG082130.1 102 PRIVRRRS 109
                       ****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MECSGRGDGG GGMVAPPFVA KTYAMVDNPA TNAVVAWGAA SNSFVVADPF AFSEILLPAH  60
FKHSNFSSFV RQLNTYGFRK VDPDRWEFAH ACFLRGQTHL LPRIVRRRSM RPSKDDNEED  120
EDSSSTMLAM EVVRLKEDQR ATEDRLAAMW RRVQDAERRP KLMLAFLLKV VRDHDVLRRL  180
AAGSGAGQDE GAEEAKRPRL LLNGEAQMQD AFVGEPGVDF TGFYTGGDGF SGVPVDDPPY  240
AFPMDGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.15e-58HSF family protein