PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG082140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 229aa    MW: 25423.7 Da    PI: 4.9875
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG082140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind81.51.3e-251859102
                       HHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXXXXX CS
      HSF_DNA-bind   9 iledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekikrkk 101
                       +++d++++ ++ w + +nsf+v+d+  f++ +Lp++Fkhsnf+SFv QLn+YgF+kv+ ++         weF++ sF +g+ +ll +i r++
  TRIDC3BG082140.1   1 MVDDPAMDAVVAWGSASNSFAVTDPFAFSEMLLPTHFKHSNFSSFVPQLNTYGFRKVNPDR---------WEFADASFLRGQMHLLPRIVRRR 84 
                       899*******************************************************999.........********************998 PP

                       X CS
      HSF_DNA-bind 102 s 102
                       +
  TRIDC3BG082140.1  85 N 85 
                       6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MVDDPAMDAV VAWGSASNSF AVTDPFAFSE MLLPTHFKHS NFSSFVPQLN TYGFRKVNPD  60
RWEFADASFL RGQMHLLPRI VRRRNGGKRG KEEAGEGDED ISSKMLAMEV VHLKEEQRAT  120
KDRLAAMWRP VQDAECRPKL MLAFLLKVVG DPDVLRRLVG NSSSNDGLFP GEGAETKRPR  180
LLLNGEAQMQ DAFVGEPGVD FTGFYTGGDG FSEVPVDNPP YAFPMDTGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.11e-46HSF family protein