PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG082160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 274aa    MW: 30045 Da    PI: 8.0842
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG082160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind100.12.1e-31191102102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k++ +++d++++ +++w   +nsfvv d+  f++ +Lp +Fkh nf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll
  TRIDC3BG082160.1  19 FVAKTFAMVDDPATDAVVRWGPASNSFVVADPFAFSHALLPAHFKHANFSSFVRQLNTYGFRKVDPDR---------WEFAHASFLRGQTHLL 102
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                        +i r++s
  TRIDC3BG082160.1 103 PRIVRRRS 110
                       ***99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MSGAGGMECS GSGGTVAPFV AKTFAMVDDP ATDAVVRWGP ASNSFVVADP FAFSHALLPA  60
HFKHANFSSF VRQLNTYGFR KVDPDRWEFA HASFLRGQTH LLPRIVRRRS GGKRGKEDAD  120
GEEDEDISSK MLAMEVVRLK EEQRATEDRL ASMRRRVQDA ERRPKLMLAF LLKVVGDPDV  180
LRRLVGNSSC GGGLFPGEGA EAKRPRLLLD GEVQVGKKKM RVDGDGLSCG INRQEAFVRE  240
PRVDFTGFYT GGDGFSDVPV ANDLPYAFPV DTGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.15e-62HSF family protein