PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG086970.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 146aa    MW: 16713 Da    PI: 8.6598
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG086970.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.11.2e-1651141199
                       EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                       f+k +++s+v+   +l lp +f+  +  g    ++ t+tlede+g +++ ++   k++    l++GW++F+ +++L +gD +vF+ +     +
  TRIDC3BG086970.1  51 FVKPMKQSHVTGGFWLGLPSHFCGLYlpG----SDDTITLEDEEGVEYKTRYLALKTG----LSAGWRRFALDHNLVDGDCLVFEWV--VWNT 133
                       89*********************888643....4569***************666666....***********************54..4445 PP

                       .EEEEE-S CS
                B3  92 lvvkvfrk 99 
                       ++v ++r+
  TRIDC3BG086970.1 134 FYVYIIRQ 141
                       59999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
LVEKKKIRRR GSSTRSDIIN RVDATDEARL HANSEAQELL RKLVPGGNPS FVKPMKQSHV  60
TGGFWLGLPS HFCGLYLPGS DDTITLEDEE GVEYKTRYLA LKTGLSAGWR RFALDHNLVD  120
GDCLVFEWVV WNTFYVYIIR QSSYYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-42B3 family protein