PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG087120.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 187aa    MW: 20485.7 Da    PI: 9.8559
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG087120.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding58.41.6e-184084147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      rgr+++eE+ l vd+++++G++ W++Ia+ m+ gRt++++k++w+++
  TRIDC3BG087120.3 40 RGRMSPEEERLVVDLHARWGNR-WSRIAKAMP-GRTDNEIKNYWRTH 84
                      89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
LALRRPAPPA LVSALPTGLN RTGKSCRLRW VNYLHPDLKR GRMSPEEERL VVDLHARWGN  60
RWSRIAKAMP GRTDNEIKNY WRTHTRKLHK DTRAASAASA STTTTTSTSM SAASPATTSS  120
SSSSSTNDND NHSHHGHGDQ ETAASQEQAD HQLLYTSGIG MDSHLLWNDA LMDSYAWGAA  180
APSMIVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59780.23e-41MYB_related family protein