PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG087210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 181aa    MW: 19443.1 Da    PI: 6.0497
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG087210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF67.11.8e-212269249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      +ie++  rqv fskRr+g++KKA+EL vLC+aeva ++fs+ gk + +
  TRIDC3BG087210.1 22 KIESEEARQVCFSKRRAGLFKKASELAVLCGAEVAAVVFSPAGKAFSF 69
                      69*****************************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
TATATAPQRR ASMGRQKIEI RKIESEEARQ VCFSKRRAGL FKKASELAVL CGAEVAAVVF  60
SPAGKAFSFG HPSVEAILDR FVPSAAQQPG AVVPGAGLGA AGDRNLAELN RQYGELRTQL  120
EAEKARKERA EEAMAKERAA ENQMAAWLDA DLRDMGEEEL MAFAAALVEV QAAVSERANQ  180
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.12e-32M-type_MADS family protein