PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC3BG087730.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 158aa    MW: 17524.1 Da    PI: 10.4471
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC3BG087730.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.42.6e-202357135
              GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                      C  C+ttkTplWR gp+g+k+LCnaCG++yrk+++
  TRIDC3BG087730.2 23 CDDCNTTKTPLWRGGPNGPKSLCNACGIRYRKRRR 57
                      99******************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
KMVEVEAAAD PEERTASGDP KACDDCNTTK TPLWRGGPNG PKSLCNACGI RYRKRRRVAM  60
GLDPEAKRKP KRDDAALSKD TKAGEEKAGD DEKAAKKTKR TATTHTVELH MVGFAKDAVL  120
KQQQRRRRQM RRRKPSCLGE EERAAILLMS LSSGVIYA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15357RKRRR
25458KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49300.11e-20GATA family protein