PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000390.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 245aa    MW: 27634.2 Da    PI: 7.3516
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000390.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.41e-242776251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rien   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s
  TRIDC4AG000390.1 27 RIENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 76
                      8**********************************************986 PP
2K-box44.18.9e-161081881999
             K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                        + a+L++e+ +    + ++ Ge+L+sL++++Lq Le+ Le++l ++ ++K++ +++qi+el +k  +l een +L+++l+
  TRIDC4AG000390.1 108 SNCARLRDELAEASLWLQQMRGEELQSLNVQQLQALEKSLESGLGSVLKTKSQKIMDQISELERKRVQLIEENARLKEQLK 188
                       567888888888888889***********************************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
SDCGEGRRGT RGEDRMAGRR ERIAIRRIEN LAARQVTFSK RRRGLFKKAE ELSILCDAEV  60
GLAVFSATGK LFQFASSSMN QIIDRYNSHS KILKKADEPS QLDLHEDSNC ARLRDELAEA  120
SLWLQQMRGE ELQSLNVQQL QALEKSLESG LGSVLKTKSQ KIMDQISELE RKRVQLIEEN  180
ARLKEQLKLQ ASKMEMQVAA DSPVVYEEGQ SSESVTNTSY PRPPLDTEDS SDTSLRLGLP  240
LYNSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.18e-75MIKC_MADS family protein