PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG000390.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 186aa    MW: 20595.2 Da    PI: 8.9915
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG000390.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF73.32e-23148451
                      -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      en   rqvtfskRr g++KKAeELS+LCdaev + +fs tgkl+ ++s
  TRIDC4AG000390.6  1 ENLAARQVTFSKRRRGLFKKAEELSILCDAEVGLAVFSATGKLFQFAS 48
                      57788****************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
ENLAARQVTF SKRRRGLFKK AEELSILCDA EVGLAVFSAT GKLFQFASSS MNQIIDRYNS  60
HSKILKKADE PSQLDLHEDS NCARLRDELA EASLWLQADE RRGAPEPERP AASGSREEPR  120
VRARLCSENQ EPKDHGPDQR ARKKEGAADR GKRKAKGASE SLQILFPPLL RVVSISGHSV  180
CDGAMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.12e-34MIKC_MADS family protein