PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG001730.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 491aa MW: 56896.3 Da PI: 7.6206

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.6	2.1e-18	62	147	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.11 62 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 147 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MEPDLTLDEV AEQNRSAPDE EDEDAFVVEE IGDSSDDRQA EPTVALEPKK GMMFSSEDDA 60 VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQYSAKNSFK PNPSTRMQCP 120 AKSNFSRRGE NFCITTVTLD HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNKN 180 FGSPVMEAGW YGNLEFGEKE CTNYLQEKRS LKLGAGDAHA LYQYFLHMHN KNRWVPAYVK 240 DTFWAGMSST KRSESVNAFF DGYVNARTTL KQFVEQYENL LRDKVEKENK ADSKSFQQQI 300 PCITHYDFER QFQAAYTTAK FKEFQDQLRG KIYCYPTQLN KEGSIFTFGV REDSKIFCEG 360 EDGKGKEKRV ILEFIVLFNQ GECDVQCMCR LFEFRGILCS HIISVLALME ITDVPSRYIL 420 QRWRKDIKRK HTFIRCSYDD MIDTQVVQRY DNLCKRSHEL AENGAESDAL HDLVMDGLNE 480 LQSKIDAYCA R

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MEPDLTLDEV AEQNRSAPDE EDEDAFVVEE IGDSSDDRQA EPTVALEPKK GMMFSSEDDA  60
VRFYKAYARK KGFGVIRRTT RHGEDKMLTY FTLACNRQGK AQYSAKNSFK PNPSTRMQCP  120
AKSNFSRRGE NFCITTVTLD HNHPISPSKA RFLRCHKKVD LHSKRRLELN DQAGARMNKN  180
FGSPVMEAGW YGNLEFGEKE CTNYLQEKRS LKLGAGDAHA LYQYFLHMHN KNRWVPAYVK  240
DTFWAGMSST KRSESVNAFF DGYVNARTTL KQFVEQYENL LRDKVEKENK ADSKSFQQQI  300
PCITHYDFER QFQAAYTTAK FKEFQDQLRG KIYCYPTQLN KEGSIFTFGV REDSKIFCEG  360
EDGKGKEKRV ILEFIVLFNQ GECDVQCMCR LFEFRGILCS HIISVLALME ITDVPSRYIL  420
QRWRKDIKRK HTFIRCSYDD MIDTQVVQRY DNLCKRSHEL AENGAESDAL HDLVMDGLNE  480
LQSKIDAYCA R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	4e-47	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.11