PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG001730.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 390aa MW: 45270.8 Da PI: 6.9921

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.1	1.4e-18	88	173	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.12 88 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 173 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MFVQPCYNLE KNVSPTDLFV SKFRYLMEPD LTLDEVAEQN RSAPDEEDED AFVVEEIGDS 60 SDDRQAEPTV ALEPKKGMMF SSEDDAVRFY KAYARKKGFG VIRRTTRHGE DKMLTYFTLA 120 CNRQGKAQYS AKNSFKPNPS TRMQCPAKSN FSRRGENFCI TTVTLDHNHP ISPSKARFLR 180 CHKKVDLHSK RRLELNDQAG ARMNKNFGSP VMEAGWYGNL EFGEKECTNY LQEKRSLKLG 240 AGDAHALYQY FLHMQSKDPA FFHVMDVAEA WAEMINKYDL QENEWLAGLY DNKNRWVPAY 300 VKDTFWAGMS STKRSESVNA FFDGYVNART TLKQFVEQYE NLLRDKVEKE NKADSKSFQQ 360 QIPCITHYDF ERQFQAAYTT AKFKEFQDQL

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MFVQPCYNLE KNVSPTDLFV SKFRYLMEPD LTLDEVAEQN RSAPDEEDED AFVVEEIGDS  60
SDDRQAEPTV ALEPKKGMMF SSEDDAVRFY KAYARKKGFG VIRRTTRHGE DKMLTYFTLA  120
CNRQGKAQYS AKNSFKPNPS TRMQCPAKSN FSRRGENFCI TTVTLDHNHP ISPSKARFLR  180
CHKKVDLHSK RRLELNDQAG ARMNKNFGSP VMEAGWYGNL EFGEKECTNY LQEKRSLKLG  240
AGDAHALYQY FLHMQSKDPA FFHVMDVAEA WAEMINKYDL QENEWLAGLY DNKNRWVPAY  300
VKDTFWAGMS STKRSESVNA FFDGYVNART TLKQFVEQYE NLLRDKVEKE NKADSKSFQQ  360
QIPCITHYDF ERQFQAAYTT AKFKEFQDQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-29	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.12