PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG001730.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 681aa MW: 78910.3 Da PI: 6.9681

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	57.9	3.4e-18	68	153	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.3 68 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 153 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
SKFRYLMEPD LTLDEVAEQN RSAPDEEDED AFVVEEIGDS SDDRQAEPTV ALEPKKGMMF 60 SSEDDAVRFY KAYARKKGFG VIRRTTRHGE DKMLTYFTLA CNRQGKAQYS AKNSFKPNPS 120 TRMQCPAKSN FSRRGENFCI TTVTLDHNHP ISPSKARFLR CHKKVDLHSK RRLELNDQAG 180 ARMNKNFGSP VMEAGWYGNL EFGEKECTNY LQEKRSLKLG AGDAHALYQY FLHMQSKDPA 240 FFHVMDVAED GRLRNVFWAD ARSRAAYESY WDVITFDTTY LTNKYTIPLA TFVGINHHGE 300 SVLLGCGLLS NEDTETFVWL FKSWLCCMSC KPPNAIITDQ CKPMQNAIEE VFPQARHRWC 360 ACHIMKKIPE NLNGYENIKS TLSNVVYDSL TKHGFDKAWA EMINKYDLQE NEWLAGLYDN 420 KNRWVPAYVK DTFWAGMSST KRSESVNAFF DGYVNARTTL KQFVEQYENL LRDKVEKENK 480 ADSKSFQQQI PCITHYDFER QFQAAYTTAK FKEFQDQLRG KIYCYPTQLN KEGSIFTFGV 540 REDSKIFCEG EDGKGKEKRV ILEFIVLFNQ GECDVQCMCR LFEFRGILCS HIISVLALME 600 ITDVPSRYIL QRWRKDIKRK HTFIRCSYDD MIDTQVVQRY DNLCKRSHEL AENGAESDAL 660 HDLVMDGLNE LQSKIDAYCA R

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

SKFRYLMEPD LTLDEVAEQN RSAPDEEDED AFVVEEIGDS SDDRQAEPTV ALEPKKGMMF  60
SSEDDAVRFY KAYARKKGFG VIRRTTRHGE DKMLTYFTLA CNRQGKAQYS AKNSFKPNPS  120
TRMQCPAKSN FSRRGENFCI TTVTLDHNHP ISPSKARFLR CHKKVDLHSK RRLELNDQAG  180
ARMNKNFGSP VMEAGWYGNL EFGEKECTNY LQEKRSLKLG AGDAHALYQY FLHMQSKDPA  240
FFHVMDVAED GRLRNVFWAD ARSRAAYESY WDVITFDTTY LTNKYTIPLA TFVGINHHGE  300
SVLLGCGLLS NEDTETFVWL FKSWLCCMSC KPPNAIITDQ CKPMQNAIEE VFPQARHRWC  360
ACHIMKKIPE NLNGYENIKS TLSNVVYDSL TKHGFDKAWA EMINKYDLQE NEWLAGLYDN  420
KNRWVPAYVK DTFWAGMSST KRSESVNAFF DGYVNARTTL KQFVEQYENL LRDKVEKENK  480
ADSKSFQQQI PCITHYDFER QFQAAYTTAK FKEFQDQLRG KIYCYPTQLN KEGSIFTFGV  540
REDSKIFCEG EDGKGKEKRV ILEFIVLFNQ GECDVQCMCR LFEFRGILCS HIISVLALME  600
ITDVPSRYIL QRWRKDIKRK HTFIRCSYDD MIDTQVVQRY DNLCKRSHEL AENGAESDAL  660
HDLVMDGLNE LQSKIDAYCA R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-131	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.3