PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG001730.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 624aa MW: 72515.5 Da PI: 8.2197

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG001730.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.1	3e-18	11	96	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YA++ GF v ++++++ +++ t t+ C+++gk++ + k+ + +++++tr++C ak + +++ +++++t++ l+HnH+++p TRIDC4AG001730.7 11 RFYKAYARKKGFGVIRRTTRHG-EDKMLTYFTLACNRQGKAQYSAKN---SFKPNPSTRMQCPAKSNFSRR-GENFCITTVTLDHNHPISP 96 5************9998887.7888************9999...999*************9.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 624 aa Download sequence
MMFSSEDDAV RFYKAYARKK GFGVIRRTTR HGEDKMLTYF TLACNRQGKA QYSAKNSFKP 60 NPSTRMQCPA KSNFSRRGEN FCITTVTLDH NHPISPSKAR FLRCHKKVDL HSKRRLELND 120 QAGARMNKNF GSPVMEAGWY GNLEFGEKEC TNYLQEKRSL KLGAGDAHAL YQYFLHMQSK 180 DPAFFHVMDV AEDGRLRNVF WADARSRAAY ESYWDVITFD TTYLTNKYTI PLATFVGINH 240 HGESVLLGCG LLSNEDTETF VWLFKSWLCC MSCKPPNAII TDQCKPMQNA IEEVFPQARH 300 RWCACHIMKK IPENLNGYEN IKSTLSNVVY DSLTKHGFDK AWAEMINKYD LQENEWLAGL 360 YDNKNRWVPA YVKDTFWAGM SSTKRSESVN AFFDGYVNAR TTLKQFVEQY ENLLRDKVEK 420 ENKADSKSFQ QQIPCITHYD FERQFQAAYT TAKFKEFQDQ LRGKIYCYPT QLNKEGSIFT 480 FGVREDSKIF CEGEDGKGKE KRVILEFIVL FNQGECDVQC MCRLFEFRGI LCSHIISVLA 540 LMEITDVPSR YILQRWRKDI KRKHTFIRCS YDDMIDTQVV QRYDNLCKRS HELAENGAES 600 DALHDLVMDG LNELQSKIDA YCAR

Sequence ? help Back to Top

Protein Sequence Length: 624 aa Download sequence

MMFSSEDDAV RFYKAYARKK GFGVIRRTTR HGEDKMLTYF TLACNRQGKA QYSAKNSFKP  60
NPSTRMQCPA KSNFSRRGEN FCITTVTLDH NHPISPSKAR FLRCHKKVDL HSKRRLELND  120
QAGARMNKNF GSPVMEAGWY GNLEFGEKEC TNYLQEKRSL KLGAGDAHAL YQYFLHMQSK  180
DPAFFHVMDV AEDGRLRNVF WADARSRAAY ESYWDVITFD TTYLTNKYTI PLATFVGINH  240
HGESVLLGCG LLSNEDTETF VWLFKSWLCC MSCKPPNAII TDQCKPMQNA IEEVFPQARH  300
RWCACHIMKK IPENLNGYEN IKSTLSNVVY DSLTKHGFDK AWAEMINKYD LQENEWLAGL  360
YDNKNRWVPA YVKDTFWAGM SSTKRSESVN AFFDGYVNAR TTLKQFVEQY ENLLRDKVEK  420
ENKADSKSFQ QQIPCITHYD FERQFQAAYT TAKFKEFQDQ LRGKIYCYPT QLNKEGSIFT  480
FGVREDSKIF CEGEDGKGKE KRVILEFIVL FNQGECDVQC MCRLFEFRGI LCSHIISVLA  540
LMEITDVPSR YILQRWRKDI KRKHTFIRCS YDDMIDTQVV QRYDNLCKRS HELAENGAES  600
DALHDLVMDG LNELQSKIDA YCAR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-128	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG001730.7