PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG001760.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 243aa    MW: 26503.6 Da    PI: 9.7031
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG001760.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.41.1e-33136192158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4AG001760.1 136 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 192
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MRRKQNMQEN GTIMIQFGQQ VPNCESSASD SPQEVSGMSE GSFNEQNDQS GNRDGYTKSS  60
DEGKMMSALS LGNSEMAYTP PKPDRTHPFA ISYPYADPYY GGAVAAYGAH AIMHPQMVGM  120
VPSSRVPLPI EPAAAEEPIY VNAKQYHAIL RRRQLRAKLE AENKLVKSRK PYLHESRHQH  180
AMKRARGTGG RFLNAKEKSE ASGGGNASAR SGHAGVPPDG GMFSKHDHTL PSGDFHYRAR  240
GGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-31NF-YA family protein