PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG001760.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 276aa    MW: 30277.8 Da    PI: 9.7099
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG001760.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.11.4e-33169225158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4AG001760.4 169 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 225
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
GFRPICRSDS WAHSAAVLLW SRLELRARAE AHEMRRKQNM QENGTIMIQF GQQVPNCESS  60
ASDSPQEVSG MSEGSFNEQN DQSGNRDGYT KSSDEGKMMS ALSLGNSEMA YTPPKPDRTH  120
PFAISYPYAD PYYGGAVAAY GAHAIMHPQM VGMVPSSRVP LPIEPAAAEE PIYVNAKQYH  180
AILRRRQLRA KLEAENKLVK SRKPYLHESR HQHAMKRARG TGGRFLNAKE KSEASGGGNA  240
SARSGHAGVP PDGGMFSKHD HTLPSGDFHY RARGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.11e-30NF-YA family protein