PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG001760.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 241aa    MW: 26075.1 Da    PI: 8.9421
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG001760.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.51.1e-33134190158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4AG001760.8 134 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 190
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
FCIPLAENGT IMIQFGQQVP NCESSASDSP QEVSGMSEGS FNEQNDQSGN RDGYTKSSDE  60
GKMMSALSLG NSEMAYTPPK PDRTHPFAIS YPYADPYYGG AVAAYGAHAI MHPQMVGMVP  120
SSRVPLPIEP AAAEEPIYVN AKQYHAILRR RQLRAKLEAE NKLVKSRKPY LHESRHQHAM  180
KRARGTGGRF LNAKEKSEAS GGGNASARSG HAGVPPDGGM FSKHDHTLPS GDFHYRARGG  240
A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.13e-31NF-YA family protein