PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG001760.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 204aa    MW: 22222.2 Da    PI: 10.1873
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG001760.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA107.98.1e-3497153158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq Rakle+e+kl  ksrkpylheSRh+hA++R+Rg+gGrF
  TRIDC4AG001760.9  97 EEPIYVNAKQYHAILRRRQLRAKLEAENKL-VKSRKPYLHESRHQHAMKRARGTGGRF 153
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MTFVSSLYLI LGNRDGYTKS SDEGKMMSAL SLGNSEMAYT PPKPDRTHPF AISYPYADPY  60
YGGAVAAYGA HAIMHPQMVG MVPSSRVPLP IEPAAAEEPI YVNAKQYHAI LRRRQLRAKL  120
EAENKLVKSR KPYLHESRHQ HAMKRARGTG GRFLNAKEKS EASGGGNASA RSGHAGVPPD  180
GGMFSKHDHT LPSGDFHYRA RGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.14e-31NF-YA family protein