PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG003950.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 604aa MW: 66259.9 Da PI: 7.2065

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG003950.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.8e-12	450	496	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq TRIDC4AG003950.5 450 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 496 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
LARSVLMKTE IEEEGTRGSW TEEDKSLCAS VLGLDAFTYL TKGGGAISEN LVAASALVGL 60 QNKLQDLVEA DGKSLRWNYA IFWQLSHTKS GELVLGWGDG SCREPHDNEM NSTTRGDIHD 120 ASSLSQQRMR KRVLERLHTA FAGADEEDDA LRIDQVTDTE LFFLASMYFA FPCHVGGPGQ 180 VFATGAPLWI PNNPHKVSPS NYCYRGFLAS AAGFRTIVLL PFEAGVLELG SMQNVLESAE 240 ALETIRSVFL GASSKKAASE KHDENSSAQI SPGLAKIFGK DLNLSRPLVN TGAVPLKMNE 300 RSWDMQKNCG GESLLLPNVR KGLQNFTWSQ ARGLNSHHQK FGNGILVVKS ETSQRSNGAA 360 HSPGLSPFQL QNSQQILTQP PPQSQTPRHI DFSVGSSSKS GVLTSQAALL GGENGSVDGL 420 CKEQVAPAME GQPPRKRGRK PANGRVEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD 480 KASLLGDAIT HITDLQKKLK EMESERDMFL ESGMVDRRVQ TPRPEVDIQV VQDEVLVRVM 540 SPMDNYPINN VFQAFEEAEV KVGESKITSN NGKVMHSFVI KSPGSEQQTR EKLIAAMSRA 600 MNSM

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

LARSVLMKTE IEEEGTRGSW TEEDKSLCAS VLGLDAFTYL TKGGGAISEN LVAASALVGL  60
QNKLQDLVEA DGKSLRWNYA IFWQLSHTKS GELVLGWGDG SCREPHDNEM NSTTRGDIHD  120
ASSLSQQRMR KRVLERLHTA FAGADEEDDA LRIDQVTDTE LFFLASMYFA FPCHVGGPGQ  180
VFATGAPLWI PNNPHKVSPS NYCYRGFLAS AAGFRTIVLL PFEAGVLELG SMQNVLESAE  240
ALETIRSVFL GASSKKAASE KHDENSSAQI SPGLAKIFGK DLNLSRPLVN TGAVPLKMNE  300
RSWDMQKNCG GESLLLPNVR KGLQNFTWSQ ARGLNSHHQK FGNGILVVKS ETSQRSNGAA  360
HSPGLSPFQL QNSQQILTQP PPQSQTPRHI DFSVGSSSKS GVLTSQAALL GGENGSVDGL  420
CKEQVAPAME GQPPRKRGRK PANGRVEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD  480
KASLLGDAIT HITDLQKKLK EMESERDMFL ESGMVDRRVQ TPRPEVDIQV VQDEVLVRVM  540
SPMDNYPINN VFQAFEEAEV KVGESKITSN NGKVMHSFVI KSPGSEQQTR EKLIAAMSRA  600
MNSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-130	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG003950.5