PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG003950.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 604aa MW: 66182.7 Da PI: 6.9255

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG003950.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.8e-12	451	497	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ +I +Lq TRIDC4AG003950.6 451 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAITHITDLQ 497 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 604 aa Download sequence
HAEGSVLMKT EIEEEGTRGS WTEEDKSLCA SVLGLDAFTY LTKGGGAISE NLVAASALVG 60 LQNKLQDLVE ADGKSLRWNY AIFWQLSHTK SGELVLGWGD GSCREPHDNE MNSTTRGDIH 120 DASSLSQQRM RKRVLERLHT AFAGADEEDD ALRIDQVTDT ELFFLASMYF AFPCHVGGPG 180 QVFATGAPLW IPNNPHKVSP SNYCYRGFLA SAAGFRTIVL LPFEAGVLEL GSMQNVLESA 240 EALETIRSVF LGASSKKAAS EKHDENSSAQ ISPGLAKIFG KDLNLSRPLV NTGAVPLKMN 300 ERSWDMQKNC GGESLLLPNV RKGLQNFTWS QARGLNSHHQ KFGNGILVVK SETSQRSNGA 360 AHSPGLSPFQ LQNSQQILTQ PPPQSQTPRH IDFSVGSSSK SGVLTSQAAL LGGENGSVDG 420 LCKEQVAPAM EGQPPRKRGR KPANGRVEAL NHVEAERQRR EKLNQRFYAL RAVVPNISKM 480 DKASLLGDAI THITDLQKKL KEMESERDMF LESGMVDRRV QTPRPEVDIQ VVQDEVLVRV 540 MSPMDNYPIN NVFQAFEEAE VKVGESKITS NNGKVMHSFV IKSPGSEQQT REKLIAAMSR 600 AMNS

Sequence ? help Back to Top

Protein Sequence Length: 604 aa Download sequence

HAEGSVLMKT EIEEEGTRGS WTEEDKSLCA SVLGLDAFTY LTKGGGAISE NLVAASALVG  60
LQNKLQDLVE ADGKSLRWNY AIFWQLSHTK SGELVLGWGD GSCREPHDNE MNSTTRGDIH  120
DASSLSQQRM RKRVLERLHT AFAGADEEDD ALRIDQVTDT ELFFLASMYF AFPCHVGGPG  180
QVFATGAPLW IPNNPHKVSP SNYCYRGFLA SAAGFRTIVL LPFEAGVLEL GSMQNVLESA  240
EALETIRSVF LGASSKKAAS EKHDENSSAQ ISPGLAKIFG KDLNLSRPLV NTGAVPLKMN  300
ERSWDMQKNC GGESLLLPNV RKGLQNFTWS QARGLNSHHQ KFGNGILVVK SETSQRSNGA  360
AHSPGLSPFQ LQNSQQILTQ PPPQSQTPRH IDFSVGSSSK SGVLTSQAAL LGGENGSVDG  420
LCKEQVAPAM EGQPPRKRGR KPANGRVEAL NHVEAERQRR EKLNQRFYAL RAVVPNISKM  480
DKASLLGDAI THITDLQKKL KEMESERDMF LESGMVDRRV QTPRPEVDIQ VVQDEVLVRV  540
MSPMDNYPIN NVFQAFEEAE VKVGESKITS NNGKVMHSFV IKSPGSEQQT REKLIAAMSR  600
AMNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	1e-130	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG003950.6