PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG004960.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 213aa    MW: 23994.1 Da    PI: 5.9498
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG004960.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP51.41.8e-166383871
           E2F_TDP 38 dvknkrRRiYDilNVLealnliekkekneirwkg 71
                      d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  TRIDC4AG004960.5  6 DEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 38
                      789*********************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MQQQYDEKNI RRRVYDALNV LMAMDIISKD KKEIQWKGLP RTSINDIEEL QADLAGVKAR  60
IEKKSAYLQE LQDQYLGMQN LINRNEQLYG SGNIPSGGVA LPFILIQTRP HATVEVEISE  120
DMQLVHFDFN TTPFELHDDS YVLKALNSYG KEENAGTSEP ISNGCEGSST PNIYRHQIQQ  180
SAMASNGTNR LPSSPPPPVP GILKGRVKHE HLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-86E2F/DP family protein