PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG005810.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 241aa MW: 26186.9 Da PI: 9.5863

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG005810.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.5	5.6e-06	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H TRIDC4AG005810.10 61 FVCEICNKGFQRDQNLQLHRRGH 83 89*******************88 PP
2	zf-C2H2	14.7	8.8e-05	137	159	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ TRIDC4AG005810.10 137 WKCDKCSKKYAVQSDWKAHAKTC 159 58******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
QDSAAAMEVD TSSATAKSGG APPPPPPGPP AKKKRALPGM PDPDAEVIAL SPKTLMATNR 60 FVCEICNKGF QRDQNLQLHR RGHNLPWKLR QRSGKEVRKR VYVCPEPSCV HHDASRALGD 120 LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DWKAHAKTCG SREYRCDCGT LFSRRDSFIT 180 HRAFCDALAE ESAKARAPPA EDGSSGAAAP PALPPPPAAP VPLQQLPPAP APQQHEEPGQ 240 I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	2e-98	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG005810.10