PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG006570.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 195aa    MW: 21054.6 Da    PI: 10.3892
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG006570.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.5e-111201601055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+YIk +q
  TRIDC4AG006570.2 120 RKRREKINERLKVLQNLIPNG-----TKVDISTMLEEAVHYIKFMQ 160
                       9******************97.....8****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
RKFGDQNGTQ SDAVTAPKKK ARSTAPPVQR KGKSSAQPKK ASKGSCSRGA QEESNGEATN  60
NVQSSSNYLS DEEGSLEMTS CSNMSSASKK TSSSRGDHGG GAKARAGRGA ATDPQSLYAR  120
KRREKINERL KVLQNLIPNG TKVDISTMLE EAVHYIKFMQ LQIKLLSSDD MWMFAPIAYN  180
GFNVGLDLKI APPQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11723PKKKARS
2120125RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-47bHLH family protein