PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG006600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 140aa    MW: 15300.2 Da    PI: 6.2497
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG006600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF29.78.3e-1059102750
                       HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF   7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                         r  tf  R  g+   A+EL vLC+aev +++f s g+  +y+
  TRIDC4AG006600.1  59 ASRWATFGERNGGLVREAQELVVLCEAEVDILVFDSAGRQLDYC 102
                       56889*******************************99988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
PYPWSAPTPS STSGPADKEA RQQRRQEVGG EGVAGEKRYQ ITSTNKHLII GRGMVDGDAS  60
RWATFGERNG GLVREAQELV VLCEAEVDIL VFDSAGRQLD YCSPHTRSVR SVVDLLVPIS  120
IHSSCTLTLI TDFLSRPFAI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.11e-12MIKC_MADS family protein