PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG006600.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 107aa    MW: 11718 Da    PI: 5.6515
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG006600.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF30.54.7e-105497750
                      HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                        r  tf  R  g+   A+EL vLC+aev +++f s g+  +y+
  TRIDC4AG006600.4 54 ASRWATFGERNGGLVREAQELVVLCEAEVDILVFDSAGRQLDYC 97
                      56889********************************9988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
APTPSSTSGP ADKEARQQRR QEVGGEGVAG EKRYQITSTN KHLIIGRGMV DGDASRWATF  60
GERNGGLVRE AQELVVLCEA EVDILVFDSA GRQLDYCSPH TRFTHMD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G20240.12e-12MIKC_MADS family protein