PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG006600.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 194aa    MW: 21716.7 Da    PI: 5.1264
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG006600.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF28.81.5e-095295750
                      HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                        r  tf  R  g+   A+EL vLC+aev +++f s g+  +y+
  TRIDC4AG006600.5 52 ASRWATFGERNGGLVREAQELVVLCEAEVDILVFDSAGRQLDYC 95
                      56889*******************************99988887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
TPSSTSGPAD KEARQQRRQE VGGEGVAGEK RYQITSTNKH LIIGRGMVDG DASRWATFGE  60
RNGGLVREAQ ELVVLCEAEV DILVFDSAGR QLDYCSPHTS YMELDTAKRI SVEGLERFRE  120
VKYYLILIIV DTSGRHNQKA ALFEEMRQVA EARSLALLLL SSFIEIFADL MVFPQKRDLM  180
IFVMDGSIVH AAFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14210.18e-12MIKC_MADS family protein