PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG007300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 249aa    MW: 27798 Da    PI: 6.6726
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG007300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.82.9e-16271131099
                       HHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  10 vlksgrlvlpkkfaeeh..ggkkeesktltled.esg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +s+rl+lp kf++    g  k  +++++l+   +g r W+vk+  +   g+++l++GW++F++a++L+ g f+vF++dg  ++ l+vkvf+
  TRIDC4AG007300.2  27 N-SSSRLRLPDKFTRVLldG-GK--PQEVKLQEaGHGrRFWDVKVVLDAD-GHMYLGRGWEQFARAHDLRLGYFLVFSFDG--DAVLTVKVFD 112
                       4.5567********777844.43..446887774555699*****65555.5778***********************887..5556999998 PP

                       S CS
                B3  99 k 99 
                        
  TRIDC4AG007300.2 113 V 113
                       5 PP
2B335.12.3e-111792491282
                       HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEE CS
                B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvF 82 
                       +++ l +p +f  +hg+ ++++++l++   +g+sW v l+++ k g+     ++ GW +F+ +n L egD++ F
  TRIDC4AG007300.2 179 QEQYLNVPVDFQLAHGYAERSKVELRM---RGKSWLVHLKHNPKTGGrprASFRYGWHQFCVDNALGEGDTCFF 249
                       5667899****99**999888766664...67*******995555555679*********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
AALCHAASTR ETGEMEGFEF FQIILDNSSS RLRLPDKFTR VLLDGGKPQE VKLQEAGHGR  60
RFWDVKVVLD ADGHMYLGRG WEQFARAHDL RLGYFLVFSF DGDAVLTVKV FDVSMCRRHY  120
QHDGDTSSGS SSDGDSGSSN ASDGGSGGNN WSLAEMDVED GPTGQFSAML RKCNLGMKQE  180
QYLNVPVDFQ LAHGYAERSK VELRMRGKSW LVHLKHNPKT GGRPRASFRY GWHQFCVDNA  240
LGEGDTCFF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.12e-15B3 family protein