PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008110.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 200aa MW: 22304.7 Da PI: 8.7243

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	57.6	5.6e-18	4	49	1	46
YABBY 1 advfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsll 46 +d++s se++Cyv+C++Cnt+lav vP + l+ +vtv+CGhC +l TRIDC4AG008110.1 4 MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLS 49 578999*************************************984 PP
2	YABBY	91.5	2.1e-28	91	151	102	162
YABBY 102 senedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162 s +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa TRIDC4AG008110.1 91 SPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 151 5556778899***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MQSMDLVSPS EHLCYVRCTY CNTVLAVGVP CKRLMDTVTV KCGHCNNLSF LSPRPPPMVQ 60 PLSPNDHHHP MGPFQGCTDC RRNQPLPPLA SPTSSDASPR APFVVKPPEK KHRLPSAYNR 120 FMREEIQRIK AAKPDIPHRE AFSMAAKNWA KCDPRCSSTV SASNSAPEPR IVVPGPQLQE 180 RATEQVVESF DIFKQMERSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69180.1	3e-52	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008110.1