PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG008110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 202aa    MW: 22546 Da    PI: 8.7243
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG008110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY129.15.9e-4041531162
             YABBY   1 advfssseqvCyvqCnfCntila..vsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekees 91 
                       +d++s se++Cyv+C++Cnt+la  v vP + l+ +vtv+CGhC +l  ++ +    +++ + +            ++  ++ +   +  +++
  TRIDC4AG008110.2   4 MDLVSPSEHLCYVRCTYCNTVLAlqVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPPMVQPLSPN------------DH--HHPMGPFQGCTDC 82 
                       578999***************9744778*****************9866444444444444443............22..2233333444444 PP

             YABBY  92 astsvsseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWah 162
                        +++      s  +++ +pr+p v++PPek+ r Psaynrf++eeiqrika+ Pdi hreafs+aaknWa 
  TRIDC4AG008110.2  83 RRNQPLPPLASPTSSDASPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAK 153
                       4433333333566778899**************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MQSMDLVSPS EHLCYVRCTY CNTVLALQVG VPCKRLMDTV TVKCGHCNNL SFLSPRPPPM  60
VQPLSPNDHH HPMGPFQGCT DCRRNQPLPP LASPTSSDAS PRAPFVVKPP EKKHRLPSAY  120
NRFMREEIQR IKAAKPDIPH REAFSMAAKN WAKCDPRCSS TVSASNSAPE PRIVVPGPQL  180
QERATEQVVE SFDIFKQMER SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.12e-50YABBY family protein