PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008140.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 165aa MW: 19268.2 Da PI: 10.2831

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008140.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	88.5	3.5e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rienk+ rqvtf+kRrng+lKKA+ELS LCdaeva+iifs +g+l+e+ss TRIDC4AG008140.3 10 RIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSS 59 8***********************************************96 PP
2	K-box	69.3	1.3e-23	85	143	13	71
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKne 71 ++e +qe+ kLk ++e Lq++qR++lGedL++Ls+keL q+e+q++ slk+iRskK + TRIDC4AG008140.3 85 ENEINYQEYLKLKTRVEFLQSSQRNILGEDLGPLSMKELDQIENQIDASLKHIRSKKFK 143 567789***************************************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MGRGKVEMRR IENKISRQVT FAKRRNGLLK KAYELSLLCD AEVALIIFSG RGRLFEFSSS 60 SCMYKTLERY RTCNSNSQEA APPLENEINY QEYLKLKTRV EFLQSSQRNI LGEDLGPLSM 120 KELDQIENQI DASLKHIRSK KFKQNIKRKW KETLPPLDLN SINKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15800.1	3e-63	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008140.3