PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008600.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 560aa MW: 62868.2 Da PI: 4.6752

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008600.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.8	8.5e-10	4	71	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +yfF+k+ + ++++ + + W++ g +++++ +g l g+k+t+++y+ ++++++tdW +h+y + TRIDC4AG008600.10 4 DGHALYFFHKKINLDNNEND--K---DISWQKNGPSRSIIL-DGGLRGCKETFALYT-FKNSPRRTDWELHQYYI 71 45678**99987655333..3...335********.999*******5.666778*******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MRQDGHALYF FHKKINLDNN ENDKDISWQK NGPSRSIILD GGLRGCKETF ALYTFKNSPR 60 RTDWELHQYY IKNTMENEGE LVLSKVFYKS QKSHCECAAK ASVQSAQDNS VTDDDSREEK 120 EDAQLEKLSV NMATESNFVE GNGNNQEQML VEMYPDQDKP CSLKHVLDTA DVNHENQIND 180 QAETELDHMS LQDRYRILLA DMRSCSARVS AEKCALNDMG NSSMQMDAET SGPVPKSESE 240 EINHEGTAYR ECSVNGKEIP VEDTEGPVND KAFNSSAELL LSQTPACGDE NVQLAPRNSG 300 TYLVDVKTEP ALDGYAIYPS ESPVKFQHSN NDGLKVSGSI LECVPKDAED SLPSLGVKSE 360 LSGYELPGLC ENSFISSMEP IVKKPHTRTL NCNGGLAPCS RQRKKRDSSE KVLEEDGYKN 420 DEGIPYPSRQ KRKKKTATDS IETALEEDAP GLLQILLDKG IVVKEIKLYD VVEDDEMLPD 480 CTESDFQDLE NVITKLFPQR TSLLKSVAKH GKGGKAIYCL ACLISLIEQS RYLQFRDCPV 540 EWGWCRDLQS FIFVFKSHNR

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MRQDGHALYF FHKKINLDNN ENDKDISWQK NGPSRSIILD GGLRGCKETF ALYTFKNSPR  60
RTDWELHQYY IKNTMENEGE LVLSKVFYKS QKSHCECAAK ASVQSAQDNS VTDDDSREEK  120
EDAQLEKLSV NMATESNFVE GNGNNQEQML VEMYPDQDKP CSLKHVLDTA DVNHENQIND  180
QAETELDHMS LQDRYRILLA DMRSCSARVS AEKCALNDMG NSSMQMDAET SGPVPKSESE  240
EINHEGTAYR ECSVNGKEIP VEDTEGPVND KAFNSSAELL LSQTPACGDE NVQLAPRNSG  300
TYLVDVKTEP ALDGYAIYPS ESPVKFQHSN NDGLKVSGSI LECVPKDAED SLPSLGVKSE  360
LSGYELPGLC ENSFISSMEP IVKKPHTRTL NCNGGLAPCS RQRKKRDSSE KVLEEDGYKN  420
DEGIPYPSRQ KRKKKTATDS IETALEEDAP GLLQILLDKG IVVKEIKLYD VVEDDEMLPD  480
CTESDFQDLE NVITKLFPQR TSLLKSVAKH GKGGKAIYCL ACLISLIEQS RYLQFRDCPV  540
EWGWCRDLQS FIFVFKSHNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	403	433	RKKRDSSEKVLEEDGYKNDEGIPYPSRQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	7e-15	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008600.10