PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008600.15

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 498aa MW: 55461.8 Da PI: 4.4567

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008600.15	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	24.2	9.1e-08	14	61	79	128
NAM 79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 k+ W++ g +++++ +g l g+k+t+++y+ ++++++tdW +h+y + TRIDC4AG008600.15 14 KDISWQKNGPSRSIIL-DGGLRGCKETFALYT-FKNSPRRTDWELHQYYI 61 4567**********.999*******5.666778*******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
FHKKINLDNN ENDKDISWQK NGPSRSIILD GGLRGCKETF ALYTFKNSPR RTDWELHQYY 60 IKNTMENEGE LVLSKDNSVT DDDSREEKED AQLEKLSVNM ATESNFVEGN GNNQEQMLVE 120 MYPDQDKPCS LKHVLDTADV NHENQINDQA ETELDHMSLQ DRYRILLADM RSCSARVSAE 180 KCALNDMGNS SMQMDAETSG PVPKSESEEI NHEGTAYREC SVNGKEIPVE DTEGPVNDKA 240 FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL DGYAIYPSES PVKFQHSNND 300 GLKVSGSILE CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC 360 NGGLAPCSRQ RKKRDSSEKV LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL 420 LQILLDKGIV VKEIKLYDVV EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK 480 GGKAIYCLAC LISLIEQV

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

FHKKINLDNN ENDKDISWQK NGPSRSIILD GGLRGCKETF ALYTFKNSPR RTDWELHQYY  60
IKNTMENEGE LVLSKDNSVT DDDSREEKED AQLEKLSVNM ATESNFVEGN GNNQEQMLVE  120
MYPDQDKPCS LKHVLDTADV NHENQINDQA ETELDHMSLQ DRYRILLADM RSCSARVSAE  180
KCALNDMGNS SMQMDAETSG PVPKSESEEI NHEGTAYREC SVNGKEIPVE DTEGPVNDKA  240
FNSSAELLLS QTPACGDENV QLAPRNSGTY LVDVKTEPAL DGYAIYPSES PVKFQHSNND  300
GLKVSGSILE CVPKDAEDSL PSLGVKSELS GYELPGLCEN SFISSMEPIV KKPHTRTLNC  360
NGGLAPCSRQ RKKRDSSEKV LEEDGYKNDE GIPYPSRQKR KKKTATDSIE TALEEDAPGL  420
LQILLDKGIV VKEIKLYDVV EDDEMLPDCT ESDFQDLENV ITKLFPQRTS LLKSVAKHGK  480
GGKAIYCLAC LISLIEQV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	371	401	RKKRDSSEKVLEEDGYKNDEGIPYPSRQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56620.1	3e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008600.15