PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008600.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 688aa MW: 77721.3 Da PI: 4.7417

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008600.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.6	9.5e-10	4	72	53	128
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + +yfF+k+ + ++++ + + W++ g +++++ +g l g+k+t+++y+ ++++++tdW +h+y + TRIDC4AG008600.2 4 QDGHALYFFHKKINLDNNEND--K---DISWQKNGPSRSIIL-DGGLRGCKETFALYT-FKNSPRRTDWELHQYYI 72 455678**99987755333..3...335********.999*******5.666778*******75 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
GMRQDGHALY FFHKKINLDN NENDKDISWQ KNGPSRSIIL DGGLRGCKET FALYTFKNSP 60 RRTDWELHQY YIKNTMENEG ELVLSKVFYK SQKSHCECAA KASVQSAQDN SVTDDDSREE 120 KEDAQLEKLS VNMATESNGN NQEQMLVEMY PDQDKPCSLK HVLDTADVNH ENQINDQAET 180 ELDHMSLQDR YRILLADMRS CSARVSAEKC ALNDMGNSSM QMDAETSGPV PKSESEEINH 240 EGTAYRECSV NGKEIPVEDT EGPVNDKAFN SSAELLLSQT PACGDENVQL APRNSGTYLV 300 DVKTEPALDG YAIYPSESPV KFQHSNNDGL KVSGSILECV PKDAEDSLPS LGVKSELSGY 360 ELPGLCENSF ISSMEPIVKK PHTRTLNCNG GLAPCSRQRK KRDSSEKVLE EDGYKNDEGI 420 PYPSRQKRKK KTATDSIETA LEEDAPGLLQ ILLDKGIVVK EIKLYDVVED DEMLPDCTES 480 DFQDLENVIT KLFPQRTSLL KSVAKHGKGG KAIYCLACLI SLIEQSRYLQ FRDCPVEWGW 540 CRDLQSFIFV FKSHNRLVLE RPEYGYATYF FEILQSVPIE WQIRRMVTAM KLSSCGRTAL 600 IENRPLLIGE DLSEGEAKVL QEYGWIPNTG LGTLLNYRDR VVHDRWNEKY STDWRMKIGK 660 LLMNGYSEGE LIITHVPLNS EEIKLENP

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

GMRQDGHALY FFHKKINLDN NENDKDISWQ KNGPSRSIIL DGGLRGCKET FALYTFKNSP  60
RRTDWELHQY YIKNTMENEG ELVLSKVFYK SQKSHCECAA KASVQSAQDN SVTDDDSREE  120
KEDAQLEKLS VNMATESNGN NQEQMLVEMY PDQDKPCSLK HVLDTADVNH ENQINDQAET  180
ELDHMSLQDR YRILLADMRS CSARVSAEKC ALNDMGNSSM QMDAETSGPV PKSESEEINH  240
EGTAYRECSV NGKEIPVEDT EGPVNDKAFN SSAELLLSQT PACGDENVQL APRNSGTYLV  300
DVKTEPALDG YAIYPSESPV KFQHSNNDGL KVSGSILECV PKDAEDSLPS LGVKSELSGY  360
ELPGLCENSF ISSMEPIVKK PHTRTLNCNG GLAPCSRQRK KRDSSEKVLE EDGYKNDEGI  420
PYPSRQKRKK KTATDSIETA LEEDAPGLLQ ILLDKGIVVK EIKLYDVVED DEMLPDCTES  480
DFQDLENVIT KLFPQRTSLL KSVAKHGKGG KAIYCLACLI SLIEQSRYLQ FRDCPVEWGW  540
CRDLQSFIFV FKSHNRLVLE RPEYGYATYF FEILQSVPIE WQIRRMVTAM KLSSCGRTAL  600
IENRPLLIGE DLSEGEAKVL QEYGWIPNTG LGTLLNYRDR VVHDRWNEKY STDWRMKIGK  660
LLMNGYSEGE LIITHVPLNS EEIKLENP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	399	429	RKKRDSSEKVLEEDGYKNDEGIPYPSRQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	3e-15	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008600.2