PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG008870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 687aa    MW: 73887 Da    PI: 6.66
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG008870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.92.2e-28206259155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  TRIDC4AG008870.1 206 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 259
                       79*******************.********************************8 PP
2Myb_DNA-binding39.61.2e-12208258148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e+++++v+av+ lG +   +k+I + m+  g+t++++ s++qk++
  TRIDC4AG008870.1 208 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 258
                       678**********************************************97 PP
3Response_reg76.78.6e-26221301109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+++ + +l+++l + +y +++++++++ al++l+e++  +D+i+ D+ mp+m+G++ll+     e++lp+i+++a +  +++ + +k
  TRIDC4AG008870.1  22 VLVVDDDQTCLAVLKRMLVQCRY-DATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIK 112
                       89*********************.*****************9999*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel +
  TRIDC4AG008870.1 113 HGACDYLIKPVRMEELKN 130
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    
AGVMAPPEEA GGGDQFPVGM KVLVVDDDQT CLAVLKRMLV QCRYDATTCS QATRALAMLR  60
ENRGAFDVII SDVHMPDMNG FRLLELVGLE MDLPVIMMSA DSRTDLVMKG IKHGACDYLI  120
KPVRMEELKN IWQHVVRKKF GGSKEHEHSG SLDDTDRNRL TNNDNEYASS ANDGAEDSWK  180
SQKKKRDKEE DDSELESGDP SNNSKKPRVV WSVELHQQFV NAVNHLGIDK AVPKKILELM  240
NVPGLTRENV ASHLQKFRLY LKRIAQHHAG MANPYSVPAS SAQVASLGGL DFQALAASGQ  300
IPPQALAALQ DELLGRPTNS LVLPGRDQSS LRLAAVKGNK PHGEQIAFGQ PIYKVQNNSY  360
AALPQNSSAV GRMPSFSAWP NNKLGMSDSM SALGHVNNSQ NSNMVLHELQ QQPDTMLSGT  420
LHTLDVKPSG IVMPSQSLNT FPASEGLSPN QNSLIIPSQS SGFLTGIPPS MKPELVLPTS  480
QSSNSLLGGI DLINQASTSQ PFISSHGGNL PGLMNRNSNV MPSQGISSFQ TGNTPYLVNQ  540
NSMGMGSKPP GVLKTESTDS LNQNYAYANH MDSGLLSSQS KNAQFGFLQS PNDITGGWSS  600
LQNMDGYRNT VGPSQPVSSS SSFQSSNAAL GKLPDQGRGK NLGFVGKGTC IPNRFAVDEI  660
ESPTNSLSHS IGSSGDIPDM FGFSGQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-107ARR-B family protein