PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG008870.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 679aa    MW: 73134.2 Da    PI: 6.7626
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG008870.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like902.2e-28198251155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  TRIDC4AG008870.2 198 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 251
                       79*******************.********************************8 PP
2Myb_DNA-binding39.61.2e-12200250148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e+++++v+av+ lG +   +k+I + m+  g+t++++ s++qk++
  TRIDC4AG008870.2 200 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 250
                       678**********************************************97 PP
3Response_reg76.78.4e-26141221109
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 
                       vl+vdD+++ + +l+++l + +y +++++++++ al++l+e++  +D+i+ D+ mp+m+G++ll+     e++lp+i+++a +  +++ + +k
  TRIDC4AG008870.2  14 VLVVDDDQTCLAVLKRMLVQCRY-DATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIK 104
                       89*********************.*****************9999*******************87754.558******************** PP

                       TTESEEEESS--HHHHHH CS
      Response_reg  92 aGakdflsKpfdpeelvk 109
                        Ga d+l Kp+ +eel +
  TRIDC4AG008870.2 105 HGACDYLIKPVRMEELKN 122
                       ***************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    
EAGGGDQFPV GMKVLVVDDD QTCLAVLKRM LVQCRYDATT CSQATRALAM LRENRGAFDV  60
IISDVHMPDM NGFRLLELVG LEMDLPVIMM SADSRTDLVM KGIKHGACDY LIKPVRMEEL  120
KNIWQHVVRK KFGGSKEHEH SGSLDDTDRN RLTNNDNEYA SSANDGAEDS WKSQKKKRDK  180
EEDDSELESG DPSNNSKKPR VVWSVELHQQ FVNAVNHLGI DKAVPKKILE LMNVPGLTRE  240
NVASHLQKFR LYLKRIAQHH AGMANPYSVP ASSAQVASLG GLDFQALAAS GQIPPQALAA  300
LQDELLGRPT NSLVLPGRDQ SSLRLAAVKG NKPHGEQIAF GQPIYKVQNN SYAALPQNSS  360
AVGRMPSFSA WPNNKLGMSD SMSALGHVNN SQNSNMVLHE LQQQPDTMLS GTLHTLDVKP  420
SGIVMPSQSL NTFPASEGLS PNQNSLIIPS QSSGFLTGIP PSMKPELVLP TSQSSNSLLG  480
GIDLINQAST SQPFISSHGG NLPGLMNRNS NVMPSQGISS FQTGNTPYLV NQNSMGMGSK  540
PPGVLKTEST DSLNQNYAYA NHMDSGLLSS QSKNAQFGFL QSPNDITGGW SSLQNMDGYR  600
NTVGPSQPVS SSSSFQSSNA ALGKLPDQGR GKNLGFVGKG TCIPNRFAVD EIESPTNSLS  660
HSIGSSGDIP DMFGFSGQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-107ARR-B family protein