PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008870.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARR-B

Protein Properties

Length: 656aa MW: 70377.9 Da PI: 7.1323

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008870.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90	2.1e-28	175	228	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av++L G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl TRIDC4AG008870.3 175 KPRVVWSVELHQQFVNAVNHL-GIDKAVPKKILELMNVPGLTRENVASHLQKFRL 228 79*****************.******************************8 PP
2	Myb_DNA-binding	39.7	1.1e-12	177	227	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+ lG + +k+I + m+ g+t++++ s++qk++ TRIDC4AG008870.3 177 RVVWSVELHQQFVNAVNHLGIDkaVPKKILELMNvPGLTRENVASHLQKFR 227 678**********************************************97 PP
3	Response_reg	58.9	2.8e-20	8	99	19	109
HHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 19 ekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +++ + ++++++++ al++l+e++ +D+i+ D+ mp+m+G++ll+ e++lp+i+++a + +++ + +k Ga d+l Kp+ +eel + TRIDC4AG008870.3 8 SSSAATTATTCSQATRALAMLRENRgaFDVIISDVHMPDMNGFRLLELVGL-EMDLPVIMMSADSRTDLVMKGIKHGACDYLIKPVRMEELKN 99 55555578899********999999***************87754.558*********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
SPCSRGCSSS AATTATTCSQ ATRALAMLRE NRGAFDVIIS DVHMPDMNGF RLLELVGLEM 60 DLPVIMMSAD SRTDLVMKGI KHGACDYLIK PVRMEELKNI WQHVVRKKFG GSKEHEHSGS 120 LDDTDRNRLT NNDNEYASSA NDGAEDSWKS QKKKRDKEED DSELESGDPS NNSKKPRVVW 180 SVELHQQFVN AVNHLGIDKA VPKKILELMN VPGLTRENVA SHLQKFRLYL KRIAQHHAGM 240 ANPYSVPASS AQVASLGGLD FQALAASGQI PPQALAALQD ELLGRPTNSL VLPGRDQSSL 300 RLAAVKGNKP HGEQIAFGQP IYKVQNNSYA ALPQNSSAVG RMPSFSAWPN NKLGMSDSMS 360 ALGHVNNSQN SNMVLHELQQ QPDTMLSGTL HTLDVKPSGI VMPSQSLNTF PASEGLSPNQ 420 NSLIIPSQSS GFLTGIPPSM KPELVLPTSQ SSNSLLGGID LINQASTSQP FISSHGGNLP 480 GLMNRNSNVM PSQGISSFQT GNTPYLVNQN SMGMGSKPPG VLKTESTDSL NQNYAYANHM 540 DSGLLSSQSK NAQFGFLQSP NDITGGWSSL QNMDGYRNTV GPSQPVSSSS SFQSSNAALG 600 KLPDQGRGKN LGFVGKGTCI PNRFAVDEIE SPTNSLSHSI GSSGDIPDMF GFSGQM

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

SPCSRGCSSS AATTATTCSQ ATRALAMLRE NRGAFDVIIS DVHMPDMNGF RLLELVGLEM  60
DLPVIMMSAD SRTDLVMKGI KHGACDYLIK PVRMEELKNI WQHVVRKKFG GSKEHEHSGS  120
LDDTDRNRLT NNDNEYASSA NDGAEDSWKS QKKKRDKEED DSELESGDPS NNSKKPRVVW  180
SVELHQQFVN AVNHLGIDKA VPKKILELMN VPGLTRENVA SHLQKFRLYL KRIAQHHAGM  240
ANPYSVPASS AQVASLGGLD FQALAASGQI PPQALAALQD ELLGRPTNSL VLPGRDQSSL  300
RLAAVKGNKP HGEQIAFGQP IYKVQNNSYA ALPQNSSAVG RMPSFSAWPN NKLGMSDSMS  360
ALGHVNNSQN SNMVLHELQQ QPDTMLSGTL HTLDVKPSGI VMPSQSLNTF PASEGLSPNQ  420
NSLIIPSQSS GFLTGIPPSM KPELVLPTSQ SSNSLLGGID LINQASTSQP FISSHGGNLP  480
GLMNRNSNVM PSQGISSFQT GNTPYLVNQN SMGMGSKPPG VLKTESTDSL NQNYAYANHM  540
DSGLLSSQSK NAQFGFLQSP NDITGGWSSL QNMDGYRNTV GPSQPVSSSS SFQSSNAALG  600
KLPDQGRGKN LGFVGKGTCI PNRFAVDEIE SPTNSLSHSI GSSGDIPDMF GFSGQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	4e-87	ARR-B family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008870.3