PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG008910.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 353aa MW: 40369.1 Da PI: 4.7978

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG008910.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	106.2	2.6e-33	6	97	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+++++++sw++ gnsfv++d + f++++L+++Fkh+nf+SF+RQLn+YgF+kv+ ++ we++++ F +g+k+ll TRIDC4AG008910.1 6 FLTKVYDMVSDAATDKVMSWTDAGNSFVIWDAHAFERDLLSRHFKHRNFSSFIRQLNTYGFRKVDPDR---------WEWANEGFLRGQKHLL 89 9**************************************************************999.........************ PP XXXXXXXX CS HSF_DNA-bind 95 ekikrkks 102 + ikrkk+ TRIDC4AG008910.1 90 KIIKRKKR 97 ***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
PEVAPFLTKV YDMVSDAATD KVMSWTDAGN SFVIWDAHAF ERDLLSRHFK HRNFSSFIRQ 60 LNTYGFRKVD PDRWEWANEG FLRGQKHLLK IIKRKKRPQE AGRELEKAPV KAAPGTENIE 120 IGRYGGLVKE VETLKRDKSL LMQQLVDLRH YQQSSNLEVQ SLIQRLQVME QNQKQMMALL 180 SIVVQNPSLL NQLVQQQQQQ QRRTNWYEDG NKKRRFPALE QGPVTDYETS GAGTEIIQYR 240 PPAPETSSQV IPDEAFLSAT TQPISSPALN MPMDIDTQTT SDNLNTQGSS GDIFADMPAL 300 PDFDDMHLWF GEDGEPTLTI QDYDESPQSE QDCQMEAQHN YNNPQHADVI TEA

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

PEVAPFLTKV YDMVSDAATD KVMSWTDAGN SFVIWDAHAF ERDLLSRHFK HRNFSSFIRQ  60
LNTYGFRKVD PDRWEWANEG FLRGQKHLLK IIKRKKRPQE AGRELEKAPV KAAPGTENIE  120
IGRYGGLVKE VETLKRDKSL LMQQLVDLRH YQQSSNLEVQ SLIQRLQVME QNQKQMMALL  180
SIVVQNPSLL NQLVQQQQQQ QRRTNWYEDG NKKRRFPALE QGPVTDYETS GAGTEIIQYR  240
PPAPETSSQV IPDEAFLSAT TQPISSPALN MPMDIDTQTT SDNLNTQGSS GDIFADMPAL  300
PDFDDMHLWF GEDGEPTLTI QDYDESPQSE QDCQMEAQHN YNNPQHADVI TEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	7e-63	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG008910.1