PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 221aa    MW: 24273.4 Da    PI: 8.8231
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.32.5e-1287135355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4AG009210.19  87 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 135
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
TGISMLQLSP GGSGTELSRN MSMEKGLKGG KRKGSGEGSS TMHSQEETGG MSQREVSMER  60
AGEKEGDAAS NREDYVHIRA KRGQATNNHS LAERFRREKI NERMKHLQDL VPGCNKITGK  120
AMMLDEIINY VQSLQRQVEF LSMKLSAVSP ELNCDLDLQD ILCPQDARSA FPGYGQRLGS  180
VHPNSNMYRA SQPGLSRPEL YGNGIIIPNP ANVHMARAAQ Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.34e-45bHLH family protein