PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG009210.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 273aa    MW: 29813.5 Da    PI: 7.0098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG009210.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-12134182355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++iN+++  L++l+P +    +k   Ka++L + ++Y++sLq
  TRIDC4AG009210.8 134 NNHSLAERFRREKINERMKHLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 182
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MYSPPCSAAG SNGERSFAAG ANPLALLDHA MDFDEHVLFP MHNAGMQDGV QFYNPTAGGS  60
GTELSRNMSM EKGLKGGKRK GSGEGSSTMH SQEETGGMSQ REVSMERAGE KEGDAASNRE  120
DYVHIRAKRG QATNNHSLAE RFRREKINER MKHLQDLVPG CNKITGKAMM LDEIINYVQS  180
LQRQVEFLSM KLSAVSPELN CDLDLQDILC PQDARSAFPG YGQRLGSVHP NSNMYRASQP  240
GLSRPELYGN GIIIPNPANV HMARAAQQLS AFP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.12e-44bHLH family protein